Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 AC010154.1-201ENST00000425857 269 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 AC005326.1-201ENST00000429197 123 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 HSPE1P21-201ENST00000438283 308 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 EEF1B2P7-201ENST00000451177 676 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 SNORD19.2-201ENST00000516978 73 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 RNU6-56P-201ENST00000516986 93 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 U1.23-201ENST00000610293 146 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 RNU1-68P-201ENST00000615382 146 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 U1.39-201ENST00000621562 146 ntBASIC3.07□□□□□ -1.92
SH3D21A4FU49 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SH3D21A4FU49 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.07□□□□□ -1.92
SH3D21A4FU49 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.06□□□□□ -1.92
SH3D21A4FU49 snoU2_19.1-201ENST00000362361 80 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 U3.8-201ENST00000363675 217 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RNU6-728P-201ENST00000365375 104 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 SNORD17-201ENST00000390930 237 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RNU6-1228P-201ENST00000391014 107 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 SNORA48.5-201ENST00000391143 135 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RPL21P3-201ENST00000395517 478 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RNU6-588P-201ENST00000410281 105 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 AL139281.1-201ENST00000422120 335 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 snoU13.14-201ENST00000459372 104 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.06□□□□□ -1.92
SH3D21A4FU49 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.06□□□□□ -1.92
SH3D21A4FU49 SNORA70.12-201ENST00000516084 153 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RNU6-659P-201ENST00000516454 104 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 AP001328.1-201ENST00000528550 176 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.06□□□□□ -1.92
SH3D21A4FU49 AC025754.2-201ENST00000606491 432 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 RNU6-91P-201ENST00000607774 107 ntBASIC3.06□□□□□ -1.92
SH3D21A4FU49 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.06□□□□□ -1.92
SH3D21A4FU49 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SH3D21A4FU49 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.06□□□□□ -1.92
SH3D21A4FU49 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SH3D21A4FU49 AC008264.2-201ENST00000610193 3731 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SH3D21A4FU49 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
SH3D21A4FU49 RNU6-834P-201ENST00000362367 110 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 SNORA63.4-201ENST00000362763 126 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 SNORA67.2-201ENST00000384300 149 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 MIR548B-201ENST00000385247 97 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 SNORA12-201ENST00000391162 147 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 NDUFB4P4-201ENST00000404822 243 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SH3D21A4FU49 RN7SKP111-201ENST00000410349 271 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 CST9LP2-201ENST00000437612 320 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 AL714022.1-201ENST00000439897 151 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 SRIP1-201ENST00000489235 288 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 RPS27P26-201ENST00000494583 239 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 MIR3646-201ENST00000578301 84 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 AC005000.2-201ENST00000605468 310 ntBASIC3.05□□□□□ -1.92
SH3D21A4FU49 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SH3D21A4FU49 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SH3D21A4FU49 AC010889.1-201ENST00000566193 2666 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 RNU6-655P-201ENST00000362858 107 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 RNU6-1210P-201ENST00000363775 107 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 RNU6-1305P-201ENST00000364353 104 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 U8.7-201ENST00000364940 136 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 RNU6-144P-201ENST00000383951 107 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 Y_RNA.525-201ENST00000384570 113 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 CYCSP49-201ENST00000420810 319 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.04□□□□□ -1.92
SH3D21A4FU49 RPS27P1-201ENST00000450552 247 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.04□□□□□ -1.92
SH3D21A4FU49 RPS3P1-201ENST00000456781 192 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 RNU7-107P-201ENST00000459121 61 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 AC117454.1-201ENST00000491120 168 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.04□□□□□ -1.92
SH3D21A4FU49 MIR5688-201ENST00000580619 83 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 AC012493.2-201ENST00000595083 291 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 AL031274.2-201ENST00000599419 203 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 AC068647.2-201ENST00000637380 353 ntBASIC3.04□□□□□ -1.92
SH3D21A4FU49 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SH3D21A4FU49 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SH3D21A4FU49 AC069528.2-201ENST00000624849 1991 ntBASIC3.03□□□□□ -1.92
SH3D21A4FU49 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SH3D21A4FU49 AC010680.1-201ENST00000590024 3590 ntBASIC3.03□□□□□ -1.92
SH3D21A4FU49 RNY1P11-201ENST00000363759 113 ntBASIC3.03□□□□□ -1.92
SH3D21A4FU49 RNU6-198P-201ENST00000384258 104 ntBASIC3.03□□□□□ -1.92
SH3D21A4FU49 RNA5SP344-201ENST00000411081 104 ntBASIC3.03□□□□□ -1.92
SH3D21A4FU49 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms