Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 MIR1254-2-201ENST00000579553 63 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 POLR3GP1-201ENST00000594073 261 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AC090115.4-201ENST00000609970 188 ntBASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SF3B6Q9Y3B4 AL355596.1-201ENST00000565399 3996 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.488-201ENST00000384403 102 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 MIR95-201ENST00000385072 81 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-131P-201ENST00000391144 107 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 AL035423.1-201ENST00000420331 213 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 CYP2C59P-201ENST00000457790 269 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 SNORA84-201ENST00000459229 133 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 RPL23AP67-201ENST00000465341 474 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 AL049830.2-201ENST00000480072 201 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-991P-201ENST00000516168 107 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 RNA5SP380-201ENST00000517190 98 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 AP003357.1-201ENST00000604497 148 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 AC005972.2-201ENST00000604690 348 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SF3B6Q9Y3B4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 MFSD8-236ENST00000641509 4050 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.215-201ENST00000364204 112 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-1240P-201ENST00000365155 104 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.343-201ENST00000365354 112 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 MIR181A2-201ENST00000384863 110 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 SNORA48.7-201ENST00000391302 135 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AL135786.1-201ENST00000415892 214 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AC008134.1-201ENST00000420943 193 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AL121914.1-201ENST00000450188 156 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 CYCSP35-201ENST00000451978 304 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RPS27P22-201ENST00000478056 241 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RPL21P129-201ENST00000491732 478 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RN7SKP18-201ENST00000516005 275 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RNA5SP272-201ENST00000516095 111 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RNU6-561P-201ENST00000516222 102 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RNU1-95P-201ENST00000516357 160 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 RNU1-128P-201ENST00000516704 160 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AC093331.1-201ENST00000521474 169 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AL391903.3-201ENST00000612158 163 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 AL121772.2-201ENST00000614331 297 ntBASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SF3B6Q9Y3B4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RNU6-1323P-201ENST00000384025 107 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RNU6-136P-201ENST00000384663 107 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 U8.11-201ENST00000384699 133 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RNU6-220P-201ENST00000390919 107 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 AL606845.1-201ENST00000404881 255 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RNA5SP511-201ENST00000410487 115 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 MTCO1P44-201ENST00000441935 243 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 SNORD105B-201ENST00000458770 79 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 U8.18-201ENST00000459285 133 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RPL23AP54-201ENST00000495129 419 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 AC107027.2-201ENST00000512197 115 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 AC245166.1-201ENST00000521012 253 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 AC127455.1-201ENST00000565496 145 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 MIR5688-201ENST00000580619 83 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 MIR3158-1-201ENST00000583596 81 ntBASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SF3B6Q9Y3B4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 RPL21P3-201ENST00000395517 478 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 MIR1289-1-201ENST00000408836 144 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 RNU2-48P-201ENST00000410694 191 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 AC006461.1-201ENST00000412637 326 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 AL353705.1-201ENST00000433468 480 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 AL162725.1-201ENST00000435405 301 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 AC093259.1-201ENST00000509755 300 ntBASIC3.01□□□□□ -1.93
SF3B6Q9Y3B4 RNU6-426P-201ENST00000516464 97 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms