Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AL135790.2-201ENST00000437701 267 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 SEM1P1-201ENST00000506694 209 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 RNU6-1278P-201ENST00000516130 107 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 SCARNA13-201ENST00000516672 275 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 RNU6-255P-201ENST00000516957 105 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 AC008739.3-201ENST00000603262 127 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 YPEL5P2-201ENST00000605553 359 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 AC134026.1-201ENST00000623249 2239 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
E4F1Q66K89 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.12□□□□□ -1.91
E4F1Q66K89 RNU6-801P-201ENST00000364087 105 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
E4F1Q66K89 SNORD14D-201ENST00000384390 87 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 MIR512-1-201ENST00000384913 84 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 MIR300-201ENST00000401138 83 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 AL139095.1-201ENST00000404326 391 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 MIR1185-2-201ENST00000408687 86 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.12□□□□□ -1.91
E4F1Q66K89 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 AC074290.1-201ENST00000448883 135 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 RNU7-57P-201ENST00000459540 60 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 CKS1BP2-201ENST00000497342 240 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.12□□□□□ -1.91
E4F1Q66K89 ATP5EP1-201ENST00000510257 156 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 AC109329.2-201ENST00000519658 482 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.12□□□□□ -1.91
E4F1Q66K89 AC012314.7-201ENST00000619693 93 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 MIR7157-201ENST00000635801 60 ntBASIC3.12□□□□□ -1.91
E4F1Q66K89 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
E4F1Q66K89 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.12□□□□□ -1.91
E4F1Q66K89 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.11□□□□□ -1.91
E4F1Q66K89 AC010329.5-201ENST00000623497 2174 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
E4F1Q66K89 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
E4F1Q66K89 RNA5SP374-201ENST00000362939 125 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 RNU6-1048P-201ENST00000364054 107 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 Y_RNA.341-201ENST00000365341 102 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 SNORA26.5-201ENST00000391215 123 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 MTCO2P33-201ENST00000402100 465 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.11□□□□□ -1.91
E4F1Q66K89 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.11□□□□□ -1.91
E4F1Q66K89 AC114982.1-201ENST00000469402 321 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 RNU6-1219P-201ENST00000516143 112 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.11□□□□□ -1.91
E4F1Q66K89 AC136628.3-201ENST00000521868 290 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.11□□□□□ -1.91
E4F1Q66K89 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.11□□□□□ -1.91
E4F1Q66K89 MIR5692C2-201ENST00000577959 77 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 MIR3133-201ENST00000583157 78 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 U6.106-201ENST00000636360 105 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
E4F1Q66K89 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
E4F1Q66K89 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
E4F1Q66K89 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
E4F1Q66K89 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
E4F1Q66K89 Y_RNA.287-201ENST00000364853 94 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 RNU6-746P-201ENST00000384112 109 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
E4F1Q66K89 U6atac.2-201ENST00000408644 118 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 AC006028.1-201ENST00000438379 402 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.1□□□□□ -1.91
E4F1Q66K89 AC003982.1-202ENST00000469928 248 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 RPS27AP9-201ENST00000477681 438 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 AC006483.1-201ENST00000487308 313 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.1□□□□□ -1.91
E4F1Q66K89 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.1□□□□□ -1.91
E4F1Q66K89 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 SNORA70.12-201ENST00000516084 153 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.1□□□□□ -1.91
E4F1Q66K89 MIR4429-201ENST00000580105 73 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 AC069294.1-201ENST00000608397 350 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 AC104465.1-201ENST00000611365 139 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
E4F1Q66K89 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.1□□□□□ -1.91
E4F1Q66K89 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.1□□□□□ -1.91
E4F1Q66K89 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
E4F1Q66K89 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
E4F1Q66K89 AC080128.1-201ENST00000474389 1917 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
E4F1Q66K89 Y_RNA.8-201ENST00000362353 102 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 Y_RNA.240-201ENST00000364469 95 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 Y_RNA.293-201ENST00000364908 93 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 RNU6-438P-201ENST00000365561 103 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 RNU4-17P-201ENST00000365598 141 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 FO393413.1-201ENST00000402892 195 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 RNU6-57P-201ENST00000411348 103 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 MICF-203ENST00000432679 129 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 AC016717.1-201ENST00000448918 286 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.09□□□□□ -1.91
E4F1Q66K89 RNU6-1212P-201ENST00000517023 104 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 MRPS18CP4-201ENST00000535821 231 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 AC021753.1-201ENST00000635724 168 ntBASIC3.09□□□□□ -1.91
E4F1Q66K89 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.09□□□□□ -1.92
E4F1Q66K89 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
E4F1Q66K89 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 216.5 ms