Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RPL12P50-201ENST00000603116 116 ntBASIC4.03□□□□□ -1.76
PTCD1O75127 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
PTCD1O75127 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCD1O75127 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTCD1O75127 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTCD1O75127 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.77
PTCD1O75127 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.03□□□□□ -1.77
PTCD1O75127 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCD1O75127 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.02□□□□□ -1.77
PTCD1O75127 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCD1O75127 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PTCD1O75127 U3.8-201ENST00000363675 217 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 RNU6-1305P-201ENST00000364353 104 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 AC006461.1-201ENST00000412637 326 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 EEF1A1P41-201ENST00000414667 207 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 AL158823.1-201ENST00000418441 478 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 EIF4EP4-201ENST00000424916 578 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 AC022018.1-201ENST00000430685 241 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 AC146507.2-201ENST00000460608 476 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 RN7SKP164-201ENST00000516138 266 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCD1O75127 MTND5P34-201ENST00000568888 325 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 MIR5582-201ENST00000579697 68 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.02□□□□□ -1.77
PTCD1O75127 MIR622-201ENST00000638396 96 ntBASIC4.02□□□□□ -1.77
PTCD1O75127 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTCD1O75127 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCD1O75127 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCD1O75127 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCD1O75127 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTCD1O75127 AC134026.1-201ENST00000623249 2239 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 RNU6-1048P-201ENST00000364054 107 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 RNU6-407P-201ENST00000365280 104 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 SNORA67.2-201ENST00000384300 149 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 MIR548B-201ENST00000385247 97 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTCD1O75127 RNU6-710P-201ENST00000410424 105 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 SRIP1-201ENST00000489235 288 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 RNU5F-4P-201ENST00000516581 114 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 RNU2-56P-201ENST00000516826 190 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.01□□□□□ -1.77
PTCD1O75127 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
PTCD1O75127 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PTCD1O75127 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.01□□□□□ -1.77
PTCD1O75127 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PTCD1O75127 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PTCD1O75127 AC058791.1-201ENST00000608412 3198 ntBASIC4.01□□□□□ -1.77
PTCD1O75127 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
PTCD1O75127 AC010329.5-201ENST00000623497 2174 ntBASIC4□□□□□ -1.77
PTCD1O75127 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4□□□□□ -1.77
PTCD1O75127 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4□□□□□ -1.77
PTCD1O75127 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PTCD1O75127 AC000403.1-201ENST00000613696 3585 ntBASIC4□□□□□ -1.77
PTCD1O75127 Y_RNA.293-201ENST00000364908 93 ntBASIC4□□□□□ -1.77
PTCD1O75127 U8.7-201ENST00000364940 136 ntBASIC4□□□□□ -1.77
PTCD1O75127 RPL23AP48-201ENST00000406913 488 ntBASIC4□□□□□ -1.77
PTCD1O75127 RNU6-855P-201ENST00000410395 104 ntBASIC4□□□□□ -1.77
PTCD1O75127 CYCSP49-201ENST00000420810 319 ntBASIC4□□□□□ -1.77
PTCD1O75127 AC009414.1-201ENST00000427200 443 ntBASIC4□□□□□ -1.77
PTCD1O75127 VWA8P1-201ENST00000510889 176 ntBASIC4□□□□□ -1.77
PTCD1O75127 RNU6-561P-201ENST00000516222 102 ntBASIC4□□□□□ -1.77
PTCD1O75127 Y_RNA.712-201ENST00000517011 92 ntBASIC4□□□□□ -1.77
PTCD1O75127 AC136628.3-201ENST00000521868 290 ntBASIC4□□□□□ -1.77
PTCD1O75127 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4□□□□□ -1.77
PTCD1O75127 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4□□□□□ -1.77
PTCD1O75127 AC103810.1-201ENST00000579873 453 ntBASIC4□□□□□ -1.77
PTCD1O75127 AC012531.5-201ENST00000611375 151 ntBASIC4□□□□□ -1.77
PTCD1O75127 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PTCD1O75127 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCD1O75127 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTCD1O75127 MIR22-201ENST00000362190 85 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 RNU6-235P-201ENST00000362644 107 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 Y_RNA.243-201ENST00000364481 109 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 Y_RNA.287-201ENST00000364853 94 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 Y_RNA.309-201ENST00000365046 111 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 Y_RNA.337-201ENST00000365312 102 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 MIR626-201ENST00000385032 94 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 SNORA40.5-201ENST00000391061 128 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 SNORD37.2-201ENST00000391075 66 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.99□□□□□ -1.77
PTCD1O75127 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.99□□□□□ -1.77
PTCD1O75127 GTF3AP2-201ENST00000557014 266 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 U6.115-201ENST00000636045 103 ntBASIC3.99□□□□□ -1.77
PTCD1O75127 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTCD1O75127 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
PTCD1O75127 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTCD1O75127 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTCD1O75127 MIR449A-201ENST00000362113 91 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 RNU6-768P-201ENST00000384683 107 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 MIR29B2-201ENST00000385055 81 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AC063976.4-201ENST00000421971 163 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AL139281.1-201ENST00000422120 335 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AL139132.1-201ENST00000431587 344 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AL357134.1-201ENST00000445848 426 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AC021205.2-201ENST00000480069 347 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AC091826.1-201ENST00000514065 313 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 RNU5E-3P-201ENST00000515913 68 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 RNA5SP112-201ENST00000515937 99 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 RNA5SP356-201ENST00000515972 94 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms