Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3AQ9Y6K1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DNMT3AQ9Y6K1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
DNMT3AQ9Y6K1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
DNMT3AQ9Y6K1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 AL137013.1-201ENST00000432946 1228 ntBASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DNMT3AQ9Y6K1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 LIN28AP1-201ENST00000429574 405 ntBASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 AL512353.2-201ENST00000448759 1962 ntBASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.53■□□□□ 0.56
DNMT3AQ9Y6K1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 AC073508.3-201ENST00000619697 1419 ntBASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DNMT3AQ9Y6K1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.52■□□□□ 0.55
DNMT3AQ9Y6K1 KRT8P32-201ENST00000512863 1461 ntBASIC18.52■□□□□ 0.55
DNMT3AQ9Y6K1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DNMT3AQ9Y6K1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms