Protein–RNA interactions for Protein: Q9Y543

HES2, Transcription factor HES-2, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES2Q9Y543 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.49■□□□□ 0.87
HES2Q9Y543 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.49■□□□□ 0.87
HES2Q9Y543 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.49■□□□□ 0.87
HES2Q9Y543 AL032819.2-201ENST00000624543 2162 ntBASIC20.49■□□□□ 0.87
HES2Q9Y543 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.49■□□□□ 0.87
HES2Q9Y543 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.49■□□□□ 0.87
HES2Q9Y543 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HES2Q9Y543 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HES2Q9Y543 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.48■□□□□ 0.87
HES2Q9Y543 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.48■□□□□ 0.87
HES2Q9Y543 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.48■□□□□ 0.87
HES2Q9Y543 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.48■□□□□ 0.87
HES2Q9Y543 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.48■□□□□ 0.87
HES2Q9Y543 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.48■□□□□ 0.87
HES2Q9Y543 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.48■□□□□ 0.87
HES2Q9Y543 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.48■□□□□ 0.87
HES2Q9Y543 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.48■□□□□ 0.87
HES2Q9Y543 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.48■□□□□ 0.87
HES2Q9Y543 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
HES2Q9Y543 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.48■□□□□ 0.87
HES2Q9Y543 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.48■□□□□ 0.87
HES2Q9Y543 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.48■□□□□ 0.87
HES2Q9Y543 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HES2Q9Y543 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HES2Q9Y543 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
HES2Q9Y543 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.47■□□□□ 0.87
HES2Q9Y543 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.47■□□□□ 0.87
HES2Q9Y543 AP000523.1-201ENST00000398242 1049 ntBASIC20.47■□□□□ 0.87
HES2Q9Y543 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 MCCD1P1-208ENST00000445732 328 ntBASIC20.47■□□□□ 0.87
HES2Q9Y543 AL671277.2-201ENST00000458060 996 ntBASIC20.47■□□□□ 0.87
HES2Q9Y543 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.47■□□□□ 0.87
HES2Q9Y543 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.47■□□□□ 0.87
HES2Q9Y543 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
HES2Q9Y543 AC141586.3-201ENST00000562166 1838 ntBASIC20.47■□□□□ 0.87
HES2Q9Y543 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HES2Q9Y543 FEM1AP3-201ENST00000403722 1741 ntBASIC20.47■□□□□ 0.87
HES2Q9Y543 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.47■□□□□ 0.87
HES2Q9Y543 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.46■□□□□ 0.87
HES2Q9Y543 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.46■□□□□ 0.87
HES2Q9Y543 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
HES2Q9Y543 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.46■□□□□ 0.87
HES2Q9Y543 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.46■□□□□ 0.87
HES2Q9Y543 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.46■□□□□ 0.87
HES2Q9Y543 SPDYE15P-201ENST00000424157 909 ntBASIC20.46■□□□□ 0.87
HES2Q9Y543 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.46■□□□□ 0.87
HES2Q9Y543 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HES2Q9Y543 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.46■□□□□ 0.87
HES2Q9Y543 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms