Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 AC092666.2-201ENST00000613287 246 ntBASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRCH1Q9Y2L9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 AC108860.2-201ENST00000562760 2183 ntBASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 AL391005.1-201ENST00000623953 2435 ntBASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 KRT18P5-201ENST00000436075 1291 ntBASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 AL118508.1-201ENST00000613502 2345 ntBASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRCH1Q9Y2L9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.96■□□□□ 0.47
LRCH1Q9Y2L9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms