Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 MIR940-201ENST00000401276 94 ntBASIC17.89■□□□□ 0.45
LHX6Q9UPM6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 AC010326.4-201ENST00000604665 891 ntBASIC17.89■□□□□ 0.45
LHX6Q9UPM6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 KRT16P6-202ENST00000425692 1426 ntBASIC17.89■□□□□ 0.45
LHX6Q9UPM6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LHX6Q9UPM6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.88■□□□□ 0.45
LHX6Q9UPM6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 MIR3197-201ENST00000582241 73 ntBASIC17.88■□□□□ 0.45
LHX6Q9UPM6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 AL353801.3-201ENST00000609898 542 ntBASIC17.88■□□□□ 0.45
LHX6Q9UPM6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.88■□□□□ 0.45
LHX6Q9UPM6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LHX6Q9UPM6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 TMEM14EP-202ENST00000639378 1296 ntBASIC17.87■□□□□ 0.45
LHX6Q9UPM6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LHX6Q9UPM6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 AL157384.1-201ENST00000445995 2473 ntBASIC17.86■□□□□ 0.45
LHX6Q9UPM6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.86■□□□□ 0.45
LHX6Q9UPM6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LHX6Q9UPM6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms