Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 AC005332.8-201ENST00000622750 2735 ntBASIC17.56■□□□□ 0.4
TMCC3Q9ULS5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.55■□□□□ 0.4
TMCC3Q9ULS5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 AC018470.1-201ENST00000624790 3129 ntBASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 MIPEPP3-201ENST00000412105 444 ntBASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 KRT18P16-201ENST00000510337 1294 ntBASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 AC083906.6-201ENST00000641366 219 ntBASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 AC073111.5-205ENST00000641717 521 ntBASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TMCC3Q9ULS5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 BICD1-207ENST00000551848 1962 ntBASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 ANO7L1-203ENST00000602586 1720 ntBASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMCC3Q9ULS5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms