Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPASTQ9UBP0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 RNF152P1-201ENST00000397754 604 ntBASIC18.82■□□□□ 0.6
SPASTQ9UBP0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 AC139887.4-201ENST00000607877 719 ntBASIC18.82■□□□□ 0.6
SPASTQ9UBP0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 AC141257.4-201ENST00000634557 245 ntBASIC18.82■□□□□ 0.6
SPASTQ9UBP0 AC136944.6-201ENST00000634818 245 ntBASIC18.82■□□□□ 0.6
SPASTQ9UBP0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPASTQ9UBP0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.81■□□□□ 0.6
SPASTQ9UBP0 AL020996.1-203ENST00000536896 2307 ntBASIC18.8■□□□□ 0.6
SPASTQ9UBP0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 YBX1P2-201ENST00000489612 999 ntBASIC18.8■□□□□ 0.6
SPASTQ9UBP0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 AL031432.5-201ENST00000641059 760 ntBASIC18.8■□□□□ 0.6
SPASTQ9UBP0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.8■□□□□ 0.6
SPASTQ9UBP0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPASTQ9UBP0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms