Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.37■□□□□ 0.37
LRFN1Q9P244 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 AC009947.2-201ENST00000444014 672 ntBASIC17.37■□□□□ 0.37
LRFN1Q9P244 HOMER2P1-201ENST00000455653 964 ntBASIC17.37■□□□□ 0.37
LRFN1Q9P244 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
LRFN1Q9P244 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRFN1Q9P244 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.36■□□□□ 0.37
LRFN1Q9P244 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.36■□□□□ 0.37
LRFN1Q9P244 AL441883.1-201ENST00000566170 1045 ntBASIC17.36■□□□□ 0.37
LRFN1Q9P244 NEK4P2-201ENST00000580004 1012 ntBASIC17.36■□□□□ 0.37
LRFN1Q9P244 MIR4674-201ENST00000582457 87 ntBASIC17.36■□□□□ 0.37
LRFN1Q9P244 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRFN1Q9P244 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.36■□□□□ 0.37
LRFN1Q9P244 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN1Q9P244 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 AC008622.2-201ENST00000617006 1229 ntBASIC17.35■□□□□ 0.37
LRFN1Q9P244 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN1Q9P244 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
LRFN1Q9P244 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN1Q9P244 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.34■□□□□ 0.37
LRFN1Q9P244 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms