Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC1Q9P0U4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CXXC1Q9P0U4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.31■□□□□ 0.84
CXXC1Q9P0U4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXXC1Q9P0U4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 KRT8P3-201ENST00000519669 1449 ntBASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 AP005901.3-202ENST00000581653 237 ntBASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 AC010240.3-201ENST00000607688 395 ntBASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 AC073314.1-201ENST00000568729 2216 ntBASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXXC1Q9P0U4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 AC092865.5-201ENST00000545435 363 ntBASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXXC1Q9P0U4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 NSUN5P1-202ENST00000421140 1535 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 NSUN5P2-203ENST00000457352 1529 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 FAM220CP-201ENST00000395253 831 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 NUS1P2-201ENST00000417358 873 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 KRT18P23-201ENST00000435622 1283 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 AC064862.7-201ENST00000604520 867 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 AL592071.1-201ENST00000611956 408 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 AL773604.1-201ENST00000617417 272 ntBASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.28■□□□□ 0.84
CXXC1Q9P0U4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 AC091607.1-201ENST00000490318 1060 ntBASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 POLD2P1-201ENST00000511220 997 ntBASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 AC104390.1-201ENST00000555663 520 ntBASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.27■□□□□ 0.84
CXXC1Q9P0U4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms