Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 AC006538.3-201ENST00000612495 578 ntBASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 LBX2-AS1-202ENST00000603175 2083 ntBASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC27.1■■□□□ 1.93
SLC52A1Q9NWF4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 IGHV3-47-201ENST00000425060 335 ntBASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 AL353801.3-201ENST00000609898 542 ntBASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 GPALPP1-207ENST00000611650 899 ntBASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 IGHV3-41-201ENST00000613121 348 ntBASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SLC52A1Q9NWF4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 KRT16P4-201ENST00000453883 522 ntBASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 AC074051.2-201ENST00000565115 352 ntBASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
SLC52A1Q9NWF4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC27.08■■□□□ 1.92
SLC52A1Q9NWF4 AC092667.1-201ENST00000434301 2586 ntBASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 Z69720.1-201ENST00000601483 472 ntBASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 GPR32P1-201ENST00000601788 811 ntBASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 TEX21P-204ENST00000641479 1693 ntBASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC27.07■■□□□ 1.92
SLC52A1Q9NWF4 KATNBL1P6-202ENST00000562413 1466 ntBASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 RN7SL606P-201ENST00000472779 293 ntBASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
SLC52A1Q9NWF4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms