Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCM2LQ9NUG4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCM2LQ9NUG4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 TFP1-202ENST00000475455 1573 ntBASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCM2LQ9NUG4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 MIR718-201ENST00000390190 70 ntBASIC18■□□□□ 0.47
CCM2LQ9NUG4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 AL359736.2-201ENST00000621992 437 ntBASIC18■□□□□ 0.47
CCM2LQ9NUG4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 FZD10-202ENST00000539839 3282 ntBASIC18■□□□□ 0.47
CCM2LQ9NUG4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18■□□□□ 0.47
CCM2LQ9NUG4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCM2LQ9NUG4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CCM2LQ9NUG4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCM2LQ9NUG4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms