Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 FSCN1P1-201ENST00000568912 1481 ntBASIC18.1■□□□□ 0.49
BRF2Q9HAW0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 PRORSD1P-201ENST00000295112 541 ntBASIC18.1■□□□□ 0.49
BRF2Q9HAW0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 CKBP1-201ENST00000565489 1086 ntBASIC18.1■□□□□ 0.49
BRF2Q9HAW0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 MIR6786-201ENST00000616843 113 ntBASIC18.1■□□□□ 0.49
BRF2Q9HAW0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
BRF2Q9HAW0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 KRT8P32-201ENST00000512863 1461 ntBASIC18.09■□□□□ 0.49
BRF2Q9HAW0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 FAM207BP-201ENST00000447172 505 ntBASIC18.09■□□□□ 0.49
BRF2Q9HAW0 B3GAT3P1-201ENST00000471720 806 ntBASIC18.09■□□□□ 0.49
BRF2Q9HAW0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 AC068587.9-201ENST00000641814 219 ntBASIC18.09■□□□□ 0.49
BRF2Q9HAW0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.09■□□□□ 0.49
BRF2Q9HAW0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRF2Q9HAW0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRF2Q9HAW0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
BRF2Q9HAW0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRF2Q9HAW0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
BRF2Q9HAW0 RNF165-205ENST00000588679 2904 ntBASIC18.08■□□□□ 0.49
BRF2Q9HAW0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.08■□□□□ 0.49
BRF2Q9HAW0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.08■□□□□ 0.48
BRF2Q9HAW0 AC011506.1-201ENST00000474329 610 ntBASIC18.08■□□□□ 0.48
BRF2Q9HAW0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 AC142381.4-202ENST00000563973 229 ntBASIC18.08■□□□□ 0.48
BRF2Q9HAW0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.08■□□□□ 0.48
BRF2Q9HAW0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
BRF2Q9HAW0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms