Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 AL512353.2-201ENST00000448759 1962 ntBASIC21.78■■□□□ 1.08
RPAP3Q9H6T3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 MIR3917-201ENST00000580971 93 ntBASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP3Q9H6T3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPAP3Q9H6T3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.77■■□□□ 1.07
RPAP3Q9H6T3 AC008556.1-201ENST00000610908 2040 ntBASIC21.77■■□□□ 1.07
RPAP3Q9H6T3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
RPAP3Q9H6T3 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.77■■□□□ 1.07
RPAP3Q9H6T3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 AL109659.2-201ENST00000606809 1674 ntBASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 TSSC2-201ENST00000450217 709 ntBASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP3Q9H6T3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 AC016734.2-201ENST00000624325 1377 ntBASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 AL162741.1-201ENST00000565563 1558 ntBASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 HLA-F-220ENST00000434407 884 ntBASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 BX276092.5-203ENST00000456199 560 ntBASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 AC092329.2-201ENST00000598402 547 ntBASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.75■■□□□ 1.07
RPAP3Q9H6T3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms