Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.68■□□□□ 0.9
HIPK3Q9H422 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HIPK3Q9H422 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HIPK3Q9H422 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 AC092667.1-201ENST00000434301 2586 ntBASIC20.67■□□□□ 0.9
HIPK3Q9H422 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIPK3Q9H422 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HIPK3Q9H422 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.66■□□□□ 0.9
HIPK3Q9H422 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.66■□□□□ 0.9
HIPK3Q9H422 AP002469.2-201ENST00000531724 424 ntBASIC20.66■□□□□ 0.9
HIPK3Q9H422 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.66■□□□□ 0.9
HIPK3Q9H422 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.66■□□□□ 0.9
HIPK3Q9H422 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.66■□□□□ 0.9
HIPK3Q9H422 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 AL162377.1-201ENST00000618844 1793 ntBASIC20.66■□□□□ 0.9
HIPK3Q9H422 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.66■□□□□ 0.9
HIPK3Q9H422 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HIPK3Q9H422 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIPK3Q9H422 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 Z83836.1-201ENST00000624605 1642 ntBASIC20.65■□□□□ 0.9
HIPK3Q9H422 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 KRT8P3-201ENST00000519669 1449 ntBASIC20.65■□□□□ 0.9
HIPK3Q9H422 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 AC104819.1-201ENST00000504587 486 ntBASIC20.65■□□□□ 0.9
HIPK3Q9H422 AC079776.4-201ENST00000511039 504 ntBASIC20.65■□□□□ 0.9
HIPK3Q9H422 AC106795.1-205ENST00000512851 1056 ntBASIC20.65■□□□□ 0.9
HIPK3Q9H422 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIPK3Q9H422 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
HIPK3Q9H422 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.64■□□□□ 0.9
HIPK3Q9H422 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HIPK3Q9H422 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.64■□□□□ 0.9
HIPK3Q9H422 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.64■□□□□ 0.89
HIPK3Q9H422 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.64■□□□□ 0.89
HIPK3Q9H422 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.64■□□□□ 0.89
HIPK3Q9H422 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIPK3Q9H422 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms