Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VPS33BQ9H267 GUSBP12-201ENST00000513727 720 ntBASIC22.77■■□□□ 1.24
VPS33BQ9H267 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 AC099336.1-202ENST00000602961 463 ntBASIC22.77■■□□□ 1.24
VPS33BQ9H267 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VPS33BQ9H267 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS33BQ9H267 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS33BQ9H267 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VPS33BQ9H267 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.77■■□□□ 1.24
VPS33BQ9H267 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS33BQ9H267 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 IGHGP-201ENST00000390555 1178 ntBASIC22.76■■□□□ 1.23
VPS33BQ9H267 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 AC138894.3-201ENST00000603787 634 ntBASIC22.76■■□□□ 1.23
VPS33BQ9H267 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
VPS33BQ9H267 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 RCC2P3-201ENST00000418112 1537 ntBASIC22.76■■□□□ 1.23
VPS33BQ9H267 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.76■■□□□ 1.23
VPS33BQ9H267 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VPS33BQ9H267 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VPS33BQ9H267 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 ENSA-205ENST00000361532 792 ntTSL 2 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
VPS33BQ9H267 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 AP000593.1-201ENST00000393668 712 ntBASIC22.75■■□□□ 1.23
VPS33BQ9H267 SAPCD2P3-201ENST00000455031 850 ntBASIC22.75■■□□□ 1.23
VPS33BQ9H267 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 REXO1L6P-202ENST00000619970 1078 ntBASIC22.75■■□□□ 1.23
VPS33BQ9H267 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
VPS33BQ9H267 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
VPS33BQ9H267 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VPS33BQ9H267 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 AC008556.1-201ENST00000610908 2040 ntBASIC22.74■■□□□ 1.23
VPS33BQ9H267 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 AC079776.4-201ENST00000511039 504 ntBASIC22.74■■□□□ 1.23
VPS33BQ9H267 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.74■■□□□ 1.23
VPS33BQ9H267 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
VPS33BQ9H267 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
VPS33BQ9H267 LINC00167-201ENST00000530583 1419 ntBASIC22.74■■□□□ 1.23
VPS33BQ9H267 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
VPS33BQ9H267 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS33BQ9H267 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.73■■□□□ 1.23
VPS33BQ9H267 KRT89P-201ENST00000620027 1478 ntBASIC22.73■■□□□ 1.23
VPS33BQ9H267 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS33BQ9H267 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS33BQ9H267 AKR1C7P-201ENST00000305623 895 ntBASIC22.73■■□□□ 1.23
VPS33BQ9H267 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
VPS33BQ9H267 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC22.73■■□□□ 1.23
VPS33BQ9H267 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
VPS33BQ9H267 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms