Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.5■□□□□ 0.87
CDT1Q9H211 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.5■□□□□ 0.87
CDT1Q9H211 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CDT1Q9H211 AC011558.1-201ENST00000623459 338 ntBASIC20.5■□□□□ 0.87
CDT1Q9H211 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CDT1Q9H211 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.5■□□□□ 0.87
CDT1Q9H211 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDT1Q9H211 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.5■□□□□ 0.87
CDT1Q9H211 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDT1Q9H211 KRT8P32-201ENST00000512863 1461 ntBASIC20.5■□□□□ 0.87
CDT1Q9H211 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.49■□□□□ 0.87
CDT1Q9H211 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.49■□□□□ 0.87
CDT1Q9H211 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDT1Q9H211 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.49■□□□□ 0.87
CDT1Q9H211 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.49■□□□□ 0.87
CDT1Q9H211 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 MIR3180-5-201ENST00000583743 153 ntBASIC20.49■□□□□ 0.87
CDT1Q9H211 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.49■□□□□ 0.87
CDT1Q9H211 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CDT1Q9H211 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDT1Q9H211 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CDT1Q9H211 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDT1Q9H211 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.49■□□□□ 0.87
CDT1Q9H211 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.48■□□□□ 0.87
CDT1Q9H211 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.48■□□□□ 0.87
CDT1Q9H211 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 RNF152P1-201ENST00000397754 604 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.48■□□□□ 0.87
CDT1Q9H211 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 AC063952.2-201ENST00000498792 1227 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 KRT18P35-201ENST00000510488 1269 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.48■□□□□ 0.87
CDT1Q9H211 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.48■□□□□ 0.87
CDT1Q9H211 AL441883.1-201ENST00000566170 1045 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 NEK4P2-201ENST00000580004 1012 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDT1Q9H211 AL445228.2-201ENST00000605589 952 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDT1Q9H211 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.48■□□□□ 0.87
CDT1Q9H211 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 AL109659.2-201ENST00000606809 1674 ntBASIC20.48■□□□□ 0.87
CDT1Q9H211 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDT1Q9H211 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.47■□□□□ 0.87
CDT1Q9H211 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.47■□□□□ 0.87
CDT1Q9H211 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.47■□□□□ 0.87
CDT1Q9H211 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDT1Q9H211 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDT1Q9H211 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.47■□□□□ 0.87
CDT1Q9H211 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.47■□□□□ 0.87
CDT1Q9H211 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.47■□□□□ 0.87
CDT1Q9H211 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.47■□□□□ 0.87
CDT1Q9H211 AC022616.7-201ENST00000525383 220 ntBASIC20.47■□□□□ 0.87
CDT1Q9H211 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.47■□□□□ 0.87
CDT1Q9H211 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.47■□□□□ 0.87
CDT1Q9H211 AL590326.2-201ENST00000625139 305 ntBASIC20.47■□□□□ 0.87
CDT1Q9H211 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDT1Q9H211 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDT1Q9H211 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDT1Q9H211 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDT1Q9H211 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.47■□□□□ 0.87
CDT1Q9H211 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.47■□□□□ 0.87
CDT1Q9H211 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDT1Q9H211 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms