Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 AC093525.10-201ENST00000625130 1569 ntBASIC17.43■□□□□ 0.38
TRIM2Q9C040 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM2Q9C040 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM2Q9C040 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AL596275.1-201ENST00000423464 877 ntBASIC17.42■□□□□ 0.38
TRIM2Q9C040 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 AL445675.2-201ENST00000620291 557 ntBASIC17.42■□□□□ 0.38
TRIM2Q9C040 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 KRT8P41-201ENST00000533985 1514 ntBASIC17.42■□□□□ 0.38
TRIM2Q9C040 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM2Q9C040 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM2Q9C040 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 Z98044.1-201ENST00000632503 1764 ntBASIC17.41■□□□□ 0.38
TRIM2Q9C040 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 AC131212.4-201ENST00000623606 975 ntBASIC17.41■□□□□ 0.38
TRIM2Q9C040 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.41■□□□□ 0.38
TRIM2Q9C040 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TRIM2Q9C040 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM2Q9C040 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRIM2Q9C040 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.4■□□□□ 0.38
TRIM2Q9C040 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms