Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CASD1Q96PB1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CASD1Q96PB1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 KRT8P26-201ENST00000534154 1276 ntBASIC20.2■□□□□ 0.82
CASD1Q96PB1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASD1Q96PB1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASD1Q96PB1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 AC093525.10-201ENST00000625130 1569 ntBASIC20.2■□□□□ 0.82
CASD1Q96PB1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASD1Q96PB1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.2■□□□□ 0.82
CASD1Q96PB1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASD1Q96PB1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.19■□□□□ 0.82
CASD1Q96PB1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 KRT18P23-201ENST00000435622 1283 ntBASIC20.19■□□□□ 0.82
CASD1Q96PB1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASD1Q96PB1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.19■□□□□ 0.82
CASD1Q96PB1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 PRELID1P1-202ENST00000567272 903 ntBASIC20.18■□□□□ 0.82
CASD1Q96PB1 AP002414.4-201ENST00000589764 1148 ntBASIC20.18■□□□□ 0.82
CASD1Q96PB1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.18■□□□□ 0.82
CASD1Q96PB1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CASD1Q96PB1 CLDN5-201ENST00000403084 2357 ntBASIC20.17■□□□□ 0.82
CASD1Q96PB1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CASD1Q96PB1 AC104390.1-201ENST00000555663 520 ntBASIC20.17■□□□□ 0.82
CASD1Q96PB1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CASD1Q96PB1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 KRT8P7-201ENST00000533003 1432 ntBASIC20.17■□□□□ 0.82
CASD1Q96PB1 HOXB1-202ENST00000577092 1414 ntBASIC20.17■□□□□ 0.82
CASD1Q96PB1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.17■□□□□ 0.82
CASD1Q96PB1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.17■□□□□ 0.82
CASD1Q96PB1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CASD1Q96PB1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 FEM1AP3-201ENST00000403722 1741 ntBASIC20.16■□□□□ 0.82
CASD1Q96PB1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CASD1Q96PB1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.16■□□□□ 0.82
CASD1Q96PB1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms