Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 MIR638-201ENST00000385237 100 ntBASIC16.29■□□□□ 0.2
CMTM3Q96MX0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 AL355472.2-201ENST00000422958 438 ntBASIC16.29■□□□□ 0.2
CMTM3Q96MX0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.29■□□□□ 0.2
CMTM3Q96MX0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 KRT18P61-201ENST00000585825 1298 ntBASIC16.28■□□□□ 0.2
CMTM3Q96MX0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 AC138028.4-201ENST00000564984 1845 ntBASIC16.28■□□□□ 0.2
CMTM3Q96MX0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CMTM3Q96MX0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 HEIH-201ENST00000623091 1652 ntBASIC16.27■□□□□ 0.2
CMTM3Q96MX0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 AC139713.2-201ENST00000641328 2723 ntBASIC16.27■□□□□ 0.2
CMTM3Q96MX0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 AC008694.1-202ENST00000636953 945 ntBASIC16.27■□□□□ 0.2
CMTM3Q96MX0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CMTM3Q96MX0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CMTM3Q96MX0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 AP006587.1-201ENST00000534129 1502 ntBASIC16.26■□□□□ 0.19
CMTM3Q96MX0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 GPX1P1-201ENST00000388829 606 ntBASIC16.26■□□□□ 0.19
CMTM3Q96MX0 AL390719.1-204ENST00000412397 1219 ntBASIC16.26■□□□□ 0.19
CMTM3Q96MX0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CMTM3Q96MX0 BID-214ENST00000617586 542 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms