Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
C9orf72Q96LT7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 BICD1-207ENST00000551848 1962 ntBASIC19.48■□□□□ 0.71
C9orf72Q96LT7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 UBE2SP1-201ENST00000450587 669 ntBASIC19.48■□□□□ 0.71
C9orf72Q96LT7 RPPH1-201ENST00000516869 333 ntBASIC19.48■□□□□ 0.71
C9orf72Q96LT7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 C1QBPP2-201ENST00000528754 825 ntBASIC19.48■□□□□ 0.71
C9orf72Q96LT7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.48■□□□□ 0.71
C9orf72Q96LT7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.48■□□□□ 0.71
C9orf72Q96LT7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 AC079598.2-202ENST00000546624 1451 ntBASIC19.47■□□□□ 0.71
C9orf72Q96LT7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.47■□□□□ 0.71
C9orf72Q96LT7 AC138932.1-201ENST00000534164 6830 ntBASIC19.47■□□□□ 0.71
C9orf72Q96LT7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.46■□□□□ 0.71
C9orf72Q96LT7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.46■□□□□ 0.71
C9orf72Q96LT7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
C9orf72Q96LT7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AL354751.1-201ENST00000412768 1863 ntBASIC19.45■□□□□ 0.7
C9orf72Q96LT7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AC120498.8-201ENST00000614275 531 ntBASIC19.45■□□□□ 0.7
C9orf72Q96LT7 AL121906.2-201ENST00000621597 723 ntBASIC19.45■□□□□ 0.7
C9orf72Q96LT7 FAM197Y4-202ENST00000622692 608 ntBASIC19.45■□□□□ 0.7
C9orf72Q96LT7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms