Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPG11Q96JI7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.03■□□□□ 0.16
SPG11Q96JI7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPG11Q96JI7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPG11Q96JI7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPG11Q96JI7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPG11Q96JI7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPG11Q96JI7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.02■□□□□ 0.16
SPG11Q96JI7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPG11Q96JI7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 AL137060.1-201ENST00000618151 2648 ntBASIC16.02■□□□□ 0.15
SPG11Q96JI7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 AF238378.1-201ENST00000526806 358 ntBASIC16.02■□□□□ 0.15
SPG11Q96JI7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPG11Q96JI7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.02■□□□□ 0.15
SPG11Q96JI7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 AC073314.1-201ENST00000568729 2216 ntBASIC16.01■□□□□ 0.15
SPG11Q96JI7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 AC233702.3-201ENST00000578656 1387 ntBASIC16.01■□□□□ 0.15
SPG11Q96JI7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 AC112497.1-201ENST00000624824 639 ntBASIC16.01■□□□□ 0.15
SPG11Q96JI7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 AC112907.3-201ENST00000577781 2400 ntBASIC16.01■□□□□ 0.15
SPG11Q96JI7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SPG11Q96JI7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPG11Q96JI7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16■□□□□ 0.15
SPG11Q96JI7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16■□□□□ 0.15
SPG11Q96JI7 MIR3917-201ENST00000580971 93 ntBASIC16■□□□□ 0.15
SPG11Q96JI7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16■□□□□ 0.15
SPG11Q96JI7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SPG11Q96JI7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 AL023284.2-201ENST00000405850 579 ntBASIC16■□□□□ 0.15
SPG11Q96JI7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16■□□□□ 0.15
SPG11Q96JI7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16■□□□□ 0.15
SPG11Q96JI7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16■□□□□ 0.15
SPG11Q96JI7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPG11Q96JI7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16■□□□□ 0.15
SPG11Q96JI7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16■□□□□ 0.15
SPG11Q96JI7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16■□□□□ 0.15
SPG11Q96JI7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms