Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.1■□□□□ 0.65
SHDQ96IW2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 HLA-A-201ENST00000376802 1334 ntBASIC19.1■□□□□ 0.65
SHDQ96IW2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.1■□□□□ 0.65
SHDQ96IW2 KRT18P23-201ENST00000435622 1283 ntBASIC19.1■□□□□ 0.65
SHDQ96IW2 VENTXP7-201ENST00000475503 772 ntBASIC19.1■□□□□ 0.65
SHDQ96IW2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.1■□□□□ 0.65
SHDQ96IW2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.1■□□□□ 0.65
SHDQ96IW2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.1■□□□□ 0.65
SHDQ96IW2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.1■□□□□ 0.65
SHDQ96IW2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHDQ96IW2 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHDQ96IW2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SHDQ96IW2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHDQ96IW2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHDQ96IW2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHDQ96IW2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 AC104390.1-201ENST00000555663 520 ntBASIC19.09■□□□□ 0.65
SHDQ96IW2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.09■□□□□ 0.65
SHDQ96IW2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.09■□□□□ 0.65
SHDQ96IW2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHDQ96IW2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.09■□□□□ 0.65
SHDQ96IW2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.09■□□□□ 0.65
SHDQ96IW2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHDQ96IW2 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.09■□□□□ 0.65
SHDQ96IW2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHDQ96IW2 LINC00167-201ENST00000530583 1419 ntBASIC19.08■□□□□ 0.65
SHDQ96IW2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.08■□□□□ 0.65
SHDQ96IW2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHDQ96IW2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHDQ96IW2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHDQ96IW2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHDQ96IW2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHDQ96IW2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHDQ96IW2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.08■□□□□ 0.64
SHDQ96IW2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
SHDQ96IW2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 SAPCD2P3-201ENST00000455031 850 ntBASIC19.08■□□□□ 0.64
SHDQ96IW2 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SHDQ96IW2 GUSBP12-201ENST00000513727 720 ntBASIC19.08■□□□□ 0.64
SHDQ96IW2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.08■□□□□ 0.64
SHDQ96IW2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.08■□□□□ 0.64
SHDQ96IW2 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.08■□□□□ 0.64
SHDQ96IW2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SHDQ96IW2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.08■□□□□ 0.64
SHDQ96IW2 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.08■□□□□ 0.64
SHDQ96IW2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.08■□□□□ 0.64
SHDQ96IW2 AL390719.2-201ENST00000606993 987 ntBASIC19.08■□□□□ 0.64
SHDQ96IW2 AC010240.3-201ENST00000607688 395 ntBASIC19.08■□□□□ 0.64
SHDQ96IW2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SHDQ96IW2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHDQ96IW2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SHDQ96IW2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 LINC00565-201ENST00000562710 2331 ntBASIC19.07■□□□□ 0.64
SHDQ96IW2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHDQ96IW2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHDQ96IW2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHDQ96IW2 KRT18P13-201ENST00000400056 1290 ntBASIC19.07■□□□□ 0.64
SHDQ96IW2 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 AC139530.3-201ENST00000620344 690 ntBASIC19.07■□□□□ 0.64
SHDQ96IW2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.07■□□□□ 0.64
SHDQ96IW2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHDQ96IW2 HOXB1-202ENST00000577092 1414 ntBASIC19.07■□□□□ 0.64
SHDQ96IW2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHDQ96IW2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.07■□□□□ 0.64
SHDQ96IW2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms