Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 RCC2P3-201ENST00000418112 1537 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 TMPOP1-202ENST00000424642 1267 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 MCCD1P1-208ENST00000445732 328 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 ATP5G1P1-201ENST00000448724 379 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 AC141257.4-201ENST00000634557 245 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 AC136944.6-201ENST00000634818 245 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 AC068587.9-201ENST00000641814 219 ntBASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ECHDC3Q96DC8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 BX664615.1-201ENST00000443558 458 ntBASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ECHDC3Q96DC8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 MIR3180-5-201ENST00000583743 153 ntBASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 AC006011.2-201ENST00000621313 1158 ntBASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.9■□□□□ 0.62
ECHDC3Q96DC8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.89■□□□□ 0.62
ECHDC3Q96DC8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ECHDC3Q96DC8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ECHDC3Q96DC8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ECHDC3Q96DC8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms