Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.34■■□□□ 1.49
ZNF428Q96B54 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF428Q96B54 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF428Q96B54 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF428Q96B54 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF428Q96B54 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.34■■□□□ 1.49
ZNF428Q96B54 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
ZNF428Q96B54 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF428Q96B54 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ZNF428Q96B54 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.33■■□□□ 1.49
ZNF428Q96B54 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF428Q96B54 KATNBL1P6-202ENST00000562413 1466 ntBASIC24.33■■□□□ 1.49
ZNF428Q96B54 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF428Q96B54 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF428Q96B54 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF428Q96B54 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
ZNF428Q96B54 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.49
ZNF428Q96B54 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.33■■□□□ 1.49
ZNF428Q96B54 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.33■■□□□ 1.49
ZNF428Q96B54 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
ZNF428Q96B54 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.33■■□□□ 1.49
ZNF428Q96B54 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.33■■□□□ 1.48
ZNF428Q96B54 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
ZNF428Q96B54 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
ZNF428Q96B54 AC093525.10-201ENST00000625130 1569 ntBASIC24.33■■□□□ 1.48
ZNF428Q96B54 KRT8P32-201ENST00000512863 1461 ntBASIC24.32■■□□□ 1.48
ZNF428Q96B54 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 SLC25A1P2-201ENST00000430693 912 ntBASIC24.32■■□□□ 1.48
ZNF428Q96B54 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ZNF428Q96B54 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC24.32■■□□□ 1.48
ZNF428Q96B54 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 AC139887.4-201ENST00000607877 719 ntBASIC24.31■■□□□ 1.48
ZNF428Q96B54 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
ZNF428Q96B54 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ZNF428Q96B54 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 AL023803.3-201ENST00000615559 522 ntBASIC24.3■■□□□ 1.48
ZNF428Q96B54 AL512353.2-201ENST00000448759 1962 ntBASIC24.3■■□□□ 1.48
ZNF428Q96B54 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC24.3■■□□□ 1.48
ZNF428Q96B54 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ZNF428Q96B54 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF428Q96B54 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 AC007663.1-201ENST00000438948 1240 ntBASIC24.29■■□□□ 1.48
ZNF428Q96B54 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF428Q96B54 AL590326.2-201ENST00000625139 305 ntBASIC24.29■■□□□ 1.48
ZNF428Q96B54 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ZNF428Q96B54 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
ZNF428Q96B54 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms