Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ATP2A3Q93084 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 AC009237.14-201ENST00000609975 1594 ntBASIC19.91■□□□□ 0.78
ATP2A3Q93084 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATP2A3Q93084 AC090340.1-201ENST00000620778 4980 ntBASIC19.91■□□□□ 0.78
ATP2A3Q93084 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 AC007663.1-201ENST00000438948 1240 ntBASIC19.9■□□□□ 0.78
ATP2A3Q93084 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 AC092338.2-201ENST00000568827 1415 ntBASIC19.9■□□□□ 0.78
ATP2A3Q93084 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATP2A3Q93084 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP2A3Q93084 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATP2A3Q93084 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 CA15P1-201ENST00000481698 905 ntBASIC19.89■□□□□ 0.77
ATP2A3Q93084 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATP2A3Q93084 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATP2A3Q93084 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 AC098818.2-201ENST00000564925 2320 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 TREX1-205ENST00000625293 1783 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 AL512604.3-201ENST00000569583 964 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 AL023803.3-201ENST00000615559 522 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 AL138966.2-201ENST00000621997 464 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
ATP2A3Q93084 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 AL020996.1-203ENST00000536896 2307 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 AC093484.2-201ENST00000580996 2166 ntBASIC19.88■□□□□ 0.77
ATP2A3Q93084 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATP2A3Q93084 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATP2A3Q93084 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATP2A3Q93084 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms