Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB40AQ8WXH6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAB40AQ8WXH6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
RAB40AQ8WXH6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.64■□□□□ 0.26
RAB40AQ8WXH6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 POM121L13P-201ENST00000422362 380 ntBASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 AC142381.4-202ENST00000563973 229 ntBASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 AC066615.1-201ENST00000640911 628 ntBASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 LTB4R2-202ENST00000528054 3092 ntBASIC16.64■□□□□ 0.25
RAB40AQ8WXH6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 GCSHP5-201ENST00000443090 522 ntBASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 AC098590.1-201ENST00000468126 897 ntBASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 AC006557.6-201ENST00000623071 864 ntBASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
RAB40AQ8WXH6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 AL158047.1-201ENST00000445918 881 ntBASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 AC120498.8-201ENST00000614275 531 ntBASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
RAB40AQ8WXH6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms