Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 MIR718-201ENST00000390190 70 ntBASIC18.49■□□□□ 0.55
ATL1Q8WXF7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 FAM207BP-201ENST00000447172 505 ntBASIC18.49■□□□□ 0.55
ATL1Q8WXF7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 BCL2-203ENST00000589955 5011 ntBASIC18.49■□□□□ 0.55
ATL1Q8WXF7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ATL1Q8WXF7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 B3GAT3P1-201ENST00000471720 806 ntBASIC18.48■□□□□ 0.55
ATL1Q8WXF7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 AL049637.2-201ENST00000641778 930 ntBASIC18.48■□□□□ 0.55
ATL1Q8WXF7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATL1Q8WXF7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATL1Q8WXF7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 AC006333.2-201ENST00000607957 2099 ntBASIC18.46■□□□□ 0.55
ATL1Q8WXF7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.46■□□□□ 0.55
ATL1Q8WXF7 AC011506.1-201ENST00000474329 610 ntBASIC18.46■□□□□ 0.55
ATL1Q8WXF7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms