Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RNF138Q8WVD3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 AL137013.1-201ENST00000432946 1228 ntBASIC17.11■□□□□ 0.33
RNF138Q8WVD3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 AC141257.4-201ENST00000634557 245 ntBASIC17.11■□□□□ 0.33
RNF138Q8WVD3 AC136944.6-201ENST00000634818 245 ntBASIC17.11■□□□□ 0.33
RNF138Q8WVD3 AC092865.7-201ENST00000641832 219 ntBASIC17.11■□□□□ 0.33
RNF138Q8WVD3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 CROCCP3-202ENST00000420820 1947 ntBASIC17.11■□□□□ 0.33
RNF138Q8WVD3 HOXB1-202ENST00000577092 1414 ntBASIC17.11■□□□□ 0.33
RNF138Q8WVD3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF138Q8WVD3 AL031598.1-201ENST00000561511 1773 ntBASIC17.1■□□□□ 0.33
RNF138Q8WVD3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF138Q8WVD3 AL357033.4-201ENST00000617703 1807 ntBASIC17.1■□□□□ 0.33
RNF138Q8WVD3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 KRT8P7-201ENST00000533003 1432 ntBASIC17.09■□□□□ 0.33
RNF138Q8WVD3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.09■□□□□ 0.33
RNF138Q8WVD3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF138Q8WVD3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF138Q8WVD3 Z98044.1-201ENST00000632503 1764 ntBASIC17.08■□□□□ 0.33
RNF138Q8WVD3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF138Q8WVD3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms