Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SNIP1Q8TAD8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 PMS2P1-201ENST00000431037 1228 ntBASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 TOB2P1-201ENST00000469761 992 ntBASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 AC120114.3-201ENST00000611923 658 ntBASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 FEM1AP1-201ENST00000431297 1995 ntBASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SNIP1Q8TAD8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 KRT18P13-201ENST00000400056 1290 ntBASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 MRPL3P1-201ENST00000400109 1033 ntBASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 AL136038.4-201ENST00000603606 1261 ntBASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 AC079602.3-201ENST00000623931 403 ntBASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SNIP1Q8TAD8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.8■□□□□ 0.44
SNIP1Q8TAD8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 HLA-A-201ENST00000376802 1334 ntBASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SNIP1Q8TAD8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms