Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 CLDN5-201ENST00000403084 2357 ntBASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 AL022342.1-201ENST00000400363 863 ntBASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 LINC01711-201ENST00000598340 967 ntBASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 RCC2P3-201ENST00000418112 1537 ntBASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
KLHDC9Q8NEP7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 AC004263.2-201ENST00000617183 678 ntBASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 AC023511.2-201ENST00000618803 211 ntBASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
KLHDC9Q8NEP7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 AP003733.1-201ENST00000491725 852 ntBASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 AC104819.1-201ENST00000504587 486 ntBASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
KLHDC9Q8NEP7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 AC233702.3-201ENST00000578656 1387 ntBASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 MIR564-202ENST00000385049 94 ntBASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.85■□□□□ 0.93
KLHDC9Q8NEP7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms