Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 NEK4P2-201ENST00000580004 1012 ntBASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 CR769767.2-201ENST00000622735 460 ntBASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RCBTB1Q8NDN9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 TREX1-205ENST00000625293 1783 ntBASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 VENTXP5-201ENST00000523979 775 ntBASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RCBTB1Q8NDN9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 SPDYE15P-201ENST00000424157 909 ntBASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 AC083849.1-201ENST00000615227 514 ntBASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RCBTB1Q8NDN9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 TSPY21P-201ENST00000433481 731 ntBASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 AC116407.4-201ENST00000623319 1061 ntBASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.16■□□□□ 0.5
RCBTB1Q8NDN9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 GPAT2P1-201ENST00000444924 1672 ntBASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RCBTB1Q8NDN9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms