Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SYNPOQ8N3V7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 FAAHP1-202ENST00000446499 1238 ntBASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 AC092597.1-201ENST00000487352 616 ntBASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 AC104417.2-201ENST00000562989 1793 ntBASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 AL691432.2-201ENST00000607222 2038 ntBASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SYNPOQ8N3V7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 AC004870.1-201ENST00000315132 882 ntBASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 TSPY23P-201ENST00000440136 739 ntBASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 RN7SL510P-201ENST00000581311 263 ntBASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SYNPOQ8N3V7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 AC016734.2-201ENST00000624325 1377 ntBASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SYNPOQ8N3V7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 NUS1P1-201ENST00000446295 882 ntBASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 MIR3180-1-201ENST00000580374 94 ntBASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 MIR3180-3-201ENST00000584616 94 ntBASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SYNPOQ8N3V7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms