Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2BBQ8N257 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2BBQ8N257 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HIST3H2BBQ8N257 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST3H2BBQ8N257 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST3H2BBQ8N257 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST3H2BBQ8N257 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST3H2BBQ8N257 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
HIST3H2BBQ8N257 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H2BBQ8N257 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST3H2BBQ8N257 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H2BBQ8N257 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H2BBQ8N257 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H2BBQ8N257 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST3H2BBQ8N257 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms