Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 AL162741.1-201ENST00000565563 1558 ntBASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 AP002383.4-201ENST00000442518 975 ntBASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS3Q8IXF0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS3Q8IXF0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 AL157888.1-201ENST00000631930 593 ntBASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS3Q8IXF0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 HLA-F-220ENST00000434407 884 ntBASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 RN7SL510P-201ENST00000581311 263 ntBASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 AC112497.1-201ENST00000624824 639 ntBASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS3Q8IXF0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 AC246785.2-201ENST00000432512 513 ntBASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS3Q8IXF0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms