Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 AFG3L1P-217ENST00000557444 2447 ntBASIC18.57■□□□□ 0.56
TRIM48Q8IWZ4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 AC007663.1-201ENST00000438948 1240 ntBASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 TSPY23P-201ENST00000440136 739 ntBASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM48Q8IWZ4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AC010203.1-204ENST00000548782 407 ntBASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AL353719.1-201ENST00000566847 864 ntBASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 AC092338.2-201ENST00000568827 1415 ntBASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM48Q8IWZ4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 AL023803.3-201ENST00000615559 522 ntBASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM48Q8IWZ4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM48Q8IWZ4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms