Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 PRELID1P1-202ENST00000567272 903 ntBASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RP1L1Q8IWN7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 LINC01311-201ENST00000565162 1445 ntBASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RP1L1Q8IWN7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 RASA4DP-201ENST00000460726 1199 ntBASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RP1L1Q8IWN7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 KRT18P1-202ENST00000452408 1331 ntBASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RP1L1Q8IWN7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms