Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 AL512353.2-201ENST00000448759 1962 ntBASIC16.85■□□□□ 0.29
LRRC28Q86X40 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.85■□□□□ 0.29
LRRC28Q86X40 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRRC28Q86X40 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 AC008687.6-201ENST00000596318 630 ntBASIC16.84■□□□□ 0.29
LRRC28Q86X40 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.84■□□□□ 0.29
LRRC28Q86X40 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LRRC28Q86X40 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
LRRC28Q86X40 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC28Q86X40 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LRRC28Q86X40 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 AC006557.6-201ENST00000623071 864 ntBASIC16.83■□□□□ 0.28
LRRC28Q86X40 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LRRC28Q86X40 AC073648.6-201ENST00000641589 218 ntBASIC16.83■□□□□ 0.28
LRRC28Q86X40 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRC28Q86X40 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 PRORSD1P-201ENST00000295112 541 ntBASIC16.82■□□□□ 0.28
LRRC28Q86X40 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC28Q86X40 POM121L13P-201ENST00000422362 380 ntBASIC16.82■□□□□ 0.28
LRRC28Q86X40 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.82■□□□□ 0.28
LRRC28Q86X40 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC28Q86X40 AC120498.8-201ENST00000614275 531 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms