Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 POM121L13P-201ENST00000422362 380 ntBASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 UNC93B4-201ENST00000505679 747 ntBASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 AC142086.2-201ENST00000569753 217 ntBASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.19□□□□□ -0.46
MRPL55Q7Z7F7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 AC090192.1-201ENST00000517740 490 ntBASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 IRX1P1-201ENST00000438849 1838 ntBASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
MRPL55Q7Z7F7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 AL049812.1-201ENST00000432563 2267 ntBASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
MRPL55Q7Z7F7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms