Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CSMD2Q7Z408 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 LINC01711-201ENST00000598340 967 ntBASIC15.95■□□□□ 0.14
CSMD2Q7Z408 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 AC104819.1-201ENST00000504587 486 ntBASIC15.95■□□□□ 0.14
CSMD2Q7Z408 RFPL4AP1-201ENST00000530883 850 ntBASIC15.95■□□□□ 0.14
CSMD2Q7Z408 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 AL136038.4-201ENST00000603606 1261 ntBASIC15.95■□□□□ 0.14
CSMD2Q7Z408 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 AC134684.3-201ENST00000641758 218 ntBASIC15.95■□□□□ 0.14
CSMD2Q7Z408 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CSMD2Q7Z408 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 AC104417.2-201ENST00000562989 1793 ntBASIC15.94■□□□□ 0.14
CSMD2Q7Z408 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 SART3-203ENST00000546611 1184 ntBASIC15.94■□□□□ 0.14
CSMD2Q7Z408 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CSMD2Q7Z408 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 AC104109.2-201ENST00000602919 1418 ntBASIC15.93■□□□□ 0.14
CSMD2Q7Z408 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 DNAJB3-202ENST00000449667 1266 ntBASIC15.93■□□□□ 0.14
CSMD2Q7Z408 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 TREX1-205ENST00000625293 1783 ntBASIC15.93■□□□□ 0.14
CSMD2Q7Z408 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 HLA-J-202ENST00000469281 1241 ntBASIC15.93■□□□□ 0.14
CSMD2Q7Z408 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 AC005332.3-201ENST00000589904 676 ntBASIC15.93■□□□□ 0.14
CSMD2Q7Z408 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 AC116407.3-201ENST00000623905 1129 ntBASIC15.93■□□□□ 0.14
CSMD2Q7Z408 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CSMD2Q7Z408 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD2Q7Z408 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CSMD2Q7Z408 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD2Q7Z408 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.92■□□□□ 0.14
CSMD2Q7Z408 HNRNPDP1-201ENST00000439535 754 ntBASIC15.92■□□□□ 0.14
CSMD2Q7Z408 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.92■□□□□ 0.14
CSMD2Q7Z408 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CSMD2Q7Z408 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms