Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC24.18■■□□□ 1.46
KDM3BQ7LBC6 AL161938.1-201ENST00000569833 2180 ntBASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 AC104390.1-201ENST00000555663 520 ntBASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 AC010240.3-201ENST00000607688 395 ntBASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
KDM3BQ7LBC6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 AC140113.3-201ENST00000605663 199 ntBASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 AC093458.2-201ENST00000623150 629 ntBASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 Z98044.1-201ENST00000632503 1764 ntBASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 KRT18P23-201ENST00000435622 1283 ntBASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
KDM3BQ7LBC6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 NPAP1P7-201ENST00000613027 823 ntBASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
KDM3BQ7LBC6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 KRT18P41-201ENST00000518924 1277 ntBASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 AC112497.1-201ENST00000624824 639 ntBASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
KDM3BQ7LBC6 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 AL049812.1-201ENST00000432563 2267 ntBASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.14■■□□□ 1.45
KDM3BQ7LBC6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3BQ7LBC6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3BQ7LBC6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.13■■□□□ 1.45
KDM3BQ7LBC6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
KDM3BQ7LBC6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms