Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.28■□□□□ 0.04
C9orf139Q6ZV77 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 VENTXP5-201ENST00000523979 775 ntBASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 AC083849.1-201ENST00000615227 514 ntBASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.27■□□□□ 0.04
C9orf139Q6ZV77 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.27■□□□□ 0.03
C9orf139Q6ZV77 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C9orf139Q6ZV77 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.27■□□□□ 0.03
C9orf139Q6ZV77 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C9orf139Q6ZV77 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
C9orf139Q6ZV77 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 LINC01311-201ENST00000565162 1445 ntBASIC15.26■□□□□ 0.03
C9orf139Q6ZV77 GPAT2P1-201ENST00000444924 1672 ntBASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 AL023284.2-201ENST00000405850 579 ntBASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
C9orf139Q6ZV77 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms