Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.01□□□□□ -0.49
LINC00575Q6W349 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.01□□□□□ -0.49
LINC00575Q6W349 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LINC00575Q6W349 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12□□□□□ -0.49
LINC00575Q6W349 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC00575Q6W349 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 AC009053.2-201ENST00000563701 2365 ntBASIC12□□□□□ -0.49
LINC00575Q6W349 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC12□□□□□ -0.49
LINC00575Q6W349 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC00575Q6W349 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12□□□□□ -0.49
LINC00575Q6W349 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12□□□□□ -0.49
LINC00575Q6W349 AF213884.3-201ENST00000563833 479 ntBASIC12□□□□□ -0.49
LINC00575Q6W349 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12□□□□□ -0.49
LINC00575Q6W349 AL162412.1-201ENST00000567129 965 ntBASIC12□□□□□ -0.49
LINC00575Q6W349 AC100791.3-201ENST00000617619 330 ntBASIC12□□□□□ -0.49
LINC00575Q6W349 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12□□□□□ -0.49
LINC00575Q6W349 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 LINC02228-203ENST00000641970 1355 ntBASIC12□□□□□ -0.49
LINC00575Q6W349 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC00575Q6W349 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
LINC00575Q6W349 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00575Q6W349 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00575Q6W349 SLC25A6P5-201ENST00000435663 894 ntBASIC11.99□□□□□ -0.49
LINC00575Q6W349 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC00575Q6W349 AC106739.1-201ENST00000617035 715 ntBASIC11.99□□□□□ -0.49
LINC00575Q6W349 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms