Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 RCC2P3-201ENST00000418112 1537 ntBASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC27A1Q6PCB7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 AL109659.2-201ENST00000606809 1674 ntBASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 KRT18P38-201ENST00000449496 1282 ntBASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC27A1Q6PCB7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 STARP1-201ENST00000397973 869 ntBASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC27A1Q6PCB7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 AL671277.2-201ENST00000458060 996 ntBASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC27A1Q6PCB7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.45■□□□□ 0.87
SLC27A1Q6PCB7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC27A1Q6PCB7 KRT8P32-201ENST00000512863 1461 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms