Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AC005229.4-201ENST00000610085 2198 ntBASIC10.1□□□□□ -0.79
RNF213Q63HN8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 MRPL20P1-201ENST00000400819 433 ntBASIC10.1□□□□□ -0.79
RNF213Q63HN8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 UNC93B6-202ENST00000528242 690 ntBASIC10.1□□□□□ -0.79
RNF213Q63HN8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 GPAT2P1-201ENST00000444924 1672 ntBASIC10.1□□□□□ -0.79
RNF213Q63HN8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
RNF213Q63HN8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC10.1□□□□□ -0.79
RNF213Q63HN8 AC124864.1-201ENST00000623408 392 ntBASIC10.1□□□□□ -0.79
RNF213Q63HN8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 AC254562.1-201ENST00000417586 456 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 AL031432.2-201ENST00000566714 459 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 AL928711.1-201ENST00000570165 459 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 HLA-J-201ENST00000462773 1622 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 PHGDH-210ENST00000641115 1638 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 AP002414.1-201ENST00000391405 1147 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 AC092910.1-201ENST00000482027 1129 ntBASIC10.09□□□□□ -0.79
RNF213Q63HN8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RNF213Q63HN8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
RNF213Q63HN8 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RNF213Q63HN8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.08□□□□□ -0.8
RNF213Q63HN8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms