Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 AC092118.2-201ENST00000613495 667 ntBASIC18.21■□□□□ 0.51
RNF220Q5VTB9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RNF220Q5VTB9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RNF220Q5VTB9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.21■□□□□ 0.5
RNF220Q5VTB9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.5
RNF220Q5VTB9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 AC073210.2-201ENST00000430369 194 ntBASIC18.2■□□□□ 0.5
RNF220Q5VTB9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF220Q5VTB9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 AC083906.2-201ENST00000511578 360 ntBASIC18.19■□□□□ 0.5
RNF220Q5VTB9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 AL031598.1-201ENST00000561511 1773 ntBASIC18.19■□□□□ 0.5
RNF220Q5VTB9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF220Q5VTB9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.18■□□□□ 0.5
RNF220Q5VTB9 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF220Q5VTB9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms