Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 TSPY21P-201ENST00000433481 731 ntBASIC19.1■□□□□ 0.65
LGSNQ5TDP6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 AC091874.3-201ENST00000512672 1195 ntBASIC19.1■□□□□ 0.65
LGSNQ5TDP6 IKBKGP1-201ENST00000612193 1073 ntBASIC19.1■□□□□ 0.65
LGSNQ5TDP6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.1■□□□□ 0.65
LGSNQ5TDP6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 HLA-B-256ENST00000639848 1089 ntBASIC19.09■□□□□ 0.65
LGSNQ5TDP6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
LGSNQ5TDP6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.08■□□□□ 0.65
LGSNQ5TDP6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 CDCA4P2-201ENST00000441182 718 ntBASIC19.08■□□□□ 0.64
LGSNQ5TDP6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LGSNQ5TDP6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LGSNQ5TDP6 MIR663A-201ENST00000385250 93 ntBASIC19.07■□□□□ 0.64
LGSNQ5TDP6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms