Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 NEFHP1-201ENST00000412845 2629 ntBASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 AC120498.9-201ENST00000339021 3867 ntBASIC16.4■□□□□ 0.22
RSPO1Q2MKA7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RSPO1Q2MKA7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 AC008622.2-201ENST00000617006 1229 ntBASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
RSPO1Q2MKA7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 AC005082.1-201ENST00000413042 2259 ntBASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 DGCR10-201ENST00000609839 495 ntBASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 AC026471.5-201ENST00000615068 467 ntBASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.38■□□□□ 0.21
RSPO1Q2MKA7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.37■□□□□ 0.21
RSPO1Q2MKA7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms